Edlib: a C/C ++ library for fast, exact sequence alignment using edit distance

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چکیده

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Edlib: a C/C ++ library for fast, exact sequence alignment using edit distance

Summary We present Edlib, an open-source C/C ++ library for exact pairwise sequence alignment using edit distance. We compare Edlib to other libraries and show that it is the fastest while not lacking in functionality and can also easily handle very large sequences. Being easy to use, flexible, fast and low on memory usage, we expect it to be easily adopted as a building block for future bioinf...

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ژورنال

عنوان ژورنال: Bioinformatics

سال: 2017

ISSN: 1367-4803,1460-2059

DOI: 10.1093/bioinformatics/btw753